Changelog
bedscout 0.0.0.9009 - 16/04/2026
impute_feature now outputs impute_score column instead of score to avoid conflict with usual column names. It also checks for impute_score column in the query genomic ranges and throws a warning on overwrite.
Fix: impute_feature actually outputs column named “annotation” instead of “feature”.
bedscout 0.0.0.9008 - 02/04/2026
- gr_universe now returns a source column that is a comma separated list of the provenance label. If no label is assigned, generic labels will be added.
- impute_feature, annotate_nearest_features, annotate_overlapping_features, annotate_nearby_features, all return a “annotation” column instead of the old “nearby_features”.
bedscout 0.0.0.9007 - 01/04/2026
- impute_feature now has a with_ties parameter to refine edge case behavior where several loci have the same overlapping score.
bedscout 0.0.0.9006 - 26/03/2026
- annotate_nearest_features function that reports closest feature to query GenomicRanges object and distance.
bedscout 0.0.0.9005 - 22/07/2024
- vignettes now use default format HTML vignette.
- prettydoc suggestion is now removed.
bedscout 0.0.0.9004 - 22/07/2024
- peaks_universe function makes use of loci_consensus to obtain a universe of peaks across conditions and replicates.
bedscout 0.0.0.9003 - 18/07/2024
- plot_euler now accepts shape allowing for more complex diagrams.
- fit_euler function added to allow inspection of euler objects for diagnostics.